BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E12LP1|AL427033
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig787 1598 0.0
>3x_Contig787
Length = 1880
Score = 1598 bits (803), Expect = 0.0
Identities = 863/875 (98%), Gaps = 8/875 (0%)
Strand = Plus / Minus
Query: 1 ttcttctgggatatagacctaaaacgytttaacaatagctaaaaataataatgaaagaat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1032 ttcttctgggatatagacctaaaacg-tttaacaatagctaaaaataataatgaaagaat 974
Query: 61 tgcatactagtaggttatagttagaagttgtaataaactcgaagctaaagttaaggttaa 120
||||||||||||| ||||| |||||| |||||||||||||||| ||||| ||||||||||
Sbjct: 973 tgcatactagtag-ttata-ttagaa-ttgtaataaactcgaa-ctaaa-ttaaggttaa 919
Query: 121 tttttgaggcctgacctcaaaactactactggactttaccgagtcgttcgtagctgttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tttttgaggcctgacctcaaaactactactggactttaccgagtcgttcgtagctgttat 859
Query: 181 aatgttggctttgattttttttcattttacaagcttattagtcgaagttaaaccatactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 aatgttggctttgattttttttcattttacaagcttattagtcgaagttaaaccatactt 799
Query: 241 agtcattcttcgtcgtaatcatcataatcatcgtaaaagcatcatttcaaatgttgtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 agtcattcttcgtcgtaatcatcataatcatcgtaaaagcatcatttcaaatgttgtgga 739
Query: 301 atattaattgtgaaatggggagaggggatgggtagtcaaataataaaggttttaamagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 738 atattaattgtgaaatggggagaggggatgggtagtcaaataataaaggttttaaaagga 679
Query: 361 aacaaaaattaaagtttttcgtatgagtttaggggagggatggtacatcttgtttgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aacaaaaattaaagtttttcgtatgagtttaggggagggatggtacatcttgtttgtttg 619
Query: 421 tctctatctcactctataaagtgcacatgagtgtgggtgtagtcatttaatttaatgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tctctatctcactctataaagtgcacatgagtgtgggtgtagtcatttaatttaatgttt 559
Query: 481 tccttttttcctttttataatgctatggtgcgtgtgtgggcatgawattgtataaaggtt 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 558 tccttttttcctttttataatgctatggtgcgtgtgtgggcatgaaattgtataaaggtt 499
Query: 541 tagtttctgttaatcattaatcaaactgaaaccttttccaattgatcatcacttggctta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tagtttctgttaatcattaatcaaactgaaaccttttccaattgatcatcacttggctta 439
Query: 601 gaagaaatagaattggccgtggaacctgtcatagcagcaacttcttccgtttggtcaact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaagaaatagaattggccgtggaacctgtcatagcagcaacttcttccgtttggtcaact 379
Query: 661 ctttcgatataagatttcaaatgaggagaggataaatctctgtggaacttctcgtgaccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctttcgatataagatttcaaatgaggagaggataaatctctgtggaacttctcgtgaccg 319
Query: 721 acaaataccaagacaaaagtgaagatgacactggaaccagtcaagatagccataacttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acaaataccaagacaaaagtgaagatgacactggaaccagtcaagatagccataacttta 259
Query: 781 gagtaatccttgtttgttac-tcmcctgcggagttccattcgattgggtacaaatcagcc 839
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagtaatccttgtttgttacttcacctgcggagttccattcgattgggtacaaatcagcc 199
Query: 840 aaatcgktttcgataacgaccg-agcggcagaagc 873
|||||| ||||||||||||||| ||||||||||||
Sbjct: 198 aaatcgttttcgataacgaccgaagcggcagaagc 164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7718
Number of Sequences: 1807
Number of extensions: 7718
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)